PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_052480_tozd.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 349aa    MW: 38433.4 Da    PI: 4.5937
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_052480_tozd.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-13113163255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  Bv3_052480_tozd.t1 113 KVSHITVERNRRKQMNDHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 163
                         789*************************9...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-17111185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.424111162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.90E-13113167No hitNo description
Gene3DG3DSA:4.10.280.104.3E-13113174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-10113163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-11117168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MDDSISSFFE DQDFRDPSFS GFPTSPEDLF SIFDALEGLK DATTTTTTTT TTTTSGGGDE  60
DATRKSFMLQ DLCESDELDA LEAELGDNEL LPKSKRAKIA TSEEKEIGQE GSKVSHITVE  120
RNRRKQMNDH LSVLRSLMPC FYVKRGDQAS IIGGVVDYIN ELQQLLQSLE AKKQRKVYSD  180
VLSPRVISSP RPSPQVLSPR KPPLSPRLNL PISPRTPQPS SPYRPRLISP TMSTPIDLSP  240
TPSSSSSSLN DSANELVANS RSPVAEVEVK FSGPNLLLKT VSPRIPGQVV KIISTLEDLS  300
LEILDINIIT MEDTMLNSFT IKIGIECQLS AEELAHQIQQ TFCSFPLLN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010671516.10.0PREDICTED: transcription factor SPEECHLESS
SwissprotQ700C71e-103SPCH_ARATH; Transcription factor SPEECHLESS
TrEMBLA0A0J8CQQ40.0A0A0J8CQQ4_BETVU; Uncharacterized protein
STRINGGLYMA04G41710.11e-125(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.19e-89bHLH family protein